"The nature of the last universal common ancestor (LUCA), its
age and its impact on the Earth system have been the subject of vigorous debate
across diverse disciplines, often based on disparate data and methods. Age
estimates for LUCA are usually based on the fossil record, varying with every
reinterpretation. The nature of LUCA’s metabolism has proven equally
contentious, with some attributing all core metabolisms to LUCA, whereas others
reconstruct a simpler life form dependent on geochemistry.
Here we infer that LUCA lived ~4.2 Ga (4.09–4.33 Ga) through
divergence time analysis of pre-LUCA gene duplicates, calibrated using
microbial fossils and isotope records under a new cross-bracing implementation.
Phylogenetic reconciliation suggests that LUCA had a genome
of at least 2.5 Mb (2.49–2.99 Mb), encoding around 2,600 proteins, comparable
to modern prokaryotes.
Our results suggest LUCA was a prokaryote-grade anaerobic
acetogen that possessed an early immune system.
Although LUCA is sometimes perceived as living in isolation,
we infer LUCA to have been part of an established ecological system. The
metabolism of LUCA would have provided a niche for other microbial community
members and hydrogen recycling by atmospheric photochemistry could have
supported a modestly productive early ecosystem.”
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